| D1 | 08/05/1994 | Bolton Wanderers | 2-3 | Barnsley | Seagraves, McGinlay | | 11,661 | Loss |
| D1 | 05/05/1994 | Bolton Wanderers | 2-1 | Luton Town | McGinlay, Thompson A | | 7,102 | Win |
| D1 | 03/05/1994 | Leicester City | 1-1 | Bolton Wanderers | McGinlay | | 18,145 | Draw |
| D1 | 30/04/1994 | Bolton Wanderers | 1-1 | Birmingham City | Walker A | | 13,602 | Draw |
| D1 | 23/04/1994 | Bolton Wanderers | 4-1 | Middlesbrough | McGinlay 3, Green | Highlights | 9,220 | Win |
| D1 | 16/04/1994 | Peterborough United | 2-3 | Bolton Wanderers | Walker A 2, Welsh (og) | | 6,616 | Win |
| D1 | 12/04/1994 | Bolton Wanderers | 0-2 | Southend United | | | 7,140 | Loss |
| D1 | 09/04/1994 | Notts County | 2-1 | Bolton Wanderers | McGinlay | | 7,270 | Loss |
| D1 | 04/04/1994 | Bolton Wanderers | 1-1 | Portsmouth | McGinlay | | 9,560 | Draw |
| D1 | 02/04/1994 | Sunderland | 2-0 | Bolton Wanderers | | | 18,574 | Loss |
| D1 | 29/03/1994 | Bolton Wanderers | 1-3 | Wolverhampton Wanderers | McGinlay | | 12,405 | Loss |
| D1 | 26/03/1994 | Bolton Wanderers | 2-2 | Bristol City | Lee D, Coyle | | 10,221 | Draw |
| D1 | 19/03/1994 | Nottingham Forest | 3-2 | Bolton Wanderers | Brown P, Green | | 23,846 | Loss |
| FACQF | 12/03/1994 | Bolton Wanderers | 0-1 | Oldham Athletic | | | 20,321 | Loss |
| D1 | 05/03/1994 | Bolton Wanderers | 3-2 | Charlton Athletic | McGinlay 3 (1 pen) | | 13,027 | Win |
| D1 | 26/02/1994 | Crystal Palace | 1-1 | Bolton Wanderers | Coyle | | 17,245 | Draw |
| D1 | 22/02/1994 | Stoke City | 2-0 | Bolton Wanderers | | | 14,257 | Loss |
| FAC5 | 20/02/1994 | Bolton Wanderers | 1-0 | Aston Villa | Stubbs | | 18,817 | Win |
| D1 | 12/02/1994 | Derby County | 2-0 | Bolton Wanderers | | | 16,698 | Loss |
| FAC4R | 09/02/1994 | Arsenal | 1-3 | Bolton Wanderers | McGinlay, McAteer J, Walker A (aet) | Highlights | 33,863 | Win |
| D1 | 05/02/1994 | Bolton Wanderers | 3-1 | Watford | Coyle, Watson (og), McGinlay (pen) | Highlights | 10,150 | Win |
| FAC4 | 31/01/1994 | Bolton Wanderers | 2-2 | Arsenal | McAteer J, Coyle | | 18,891 | Draw |
| D1 | 23/01/1994 | Bolton Wanderers | 2-1 | Tranmere Rovers | John McGinlay, John McGinlay | Highlights | 11,550 | Win |
| FAC3R | 19/01/1994 | Everton | 2-3 | Bolton Wanderers | McGinlay, Stubbs, Coyle (aet) | | 34,652 | Win |
| D1 | 15/01/1994 | Millwall | 1-0 | Bolton Wanderers | | | 9,772 | Loss |
| D1 | 12/01/1994 | Southend United | 0-2 | Bolton Wanderers | Stubbs, McGinlay | | 4,969 | Win |
| FAC3 | 08/01/1994 | Bolton Wanderers | 1-1 | Everton | Patterson | | 21,072 | Draw |
| D1 | 03/01/1994 | Wolverhampton Wanderers | 1-0 | Bolton Wanderers | | | 24,053 | Loss |
| D1 | 01/01/1994 | Bolton Wanderers | 4-2 | Notts County | Fleck, Green, Thompson A, Draper (og) | | 11,041 | Win |
| D1 | 28/12/1993 | Portsmouth | 0-0 | Bolton Wanderers | | | 14,276 | Draw |
| D1 | 27/12/1993 | Bolton Wanderers | 0-0 | Sunderland | | | 18,496 | Draw |
| AITI | 22/12/1993 | Ascoli | 1-1 | Bolton Wanderers | Seagraves | | 1,000 | Draw |
| D1 | 18/12/1993 | Bolton Wanderers | 1-1 | Grimsby Town | Coyle | | 9,431 | Draw |
| D1 | 11/12/1993 | Oxford United | 0-2 | Bolton Wanderers | Kelly, Thompson A | | 5,559 | Win |
| D1 | 07/12/1993 | Bolton Wanderers | 1-1 | West Bromwich Albion | Coyle | | 9,277 | Draw |
| FAC2 | 04/12/1993 | Lincoln City | 1-3 | Bolton Wanderers | Thompson A, Brown P, Coyle | Highlights | 6,250 | Win |
| D1 | 27/11/1993 | Barnsley | 1-1 | Bolton Wanderers | Coyle | | 6,755 | Draw |
| D1 | 24/11/1993 | Bolton Wanderers | 1-0 | Crystal Palace | McGinlay | | 7,486 | Win |
| D1 | 21/11/1993 | Middlesbrough | 0-1 | Bolton Wanderers | McGinlay | Highlights | 6,828 | Win |
| AITI | 16/11/1993 | Pisa | 1-1 | Bolton Wanderers | Phillips J | | 1,000 | Draw |
| FAC1 | 13/11/1993 | Gretna | 2-3 | Bolton Wanderers | McGinlay (pen), Coyle 2 (played at Burnden Park) | | 6,447 | Win |
| AITI | 09/11/1993 | Bolton Wanderers | 3-3 | Brescia | Coyle, McGinlay, Green | | 3,021 | Draw |
| D1 | 06/11/1993 | West Bromwich Albion | 2-2 | Bolton Wanderers | Green, McAteer J | | 15,709 | Draw |
| D1 | 02/11/1993 | Bolton Wanderers | 1-1 | Peterborough United | McGinlay | | 7,058 | Draw |
| D1 | 30/10/1993 | Bolton Wanderers | 0-2 | Derby County | | | 11,464 | Loss |
| D1 | 23/10/1993 | Watford | 4-3 | Bolton Wanderers | McAteer J, Lee D, Thompson A | | 7,492 | Loss |
| D1 | 19/10/1993 | Birmingham City | 2-1 | Bolton Wanderers | Thompson A | | 12,071 | Loss |
| D1 | 16/10/1993 | Bolton Wanderers | 4-0 | Millwall | McGinlay 2, McAteer J, Lee D | | 9,386 | Win |
| AITI | 12/10/1993 | Bolton Wanderers | 5-0 | Ancona | McGinlay 2, McAteer J, Thompson A, Phillips J | | 3,448 | Win |
| D1 | 09/10/1993 | Tranmere Rovers | 2-1 | Bolton Wanderers | Brown P | | 10,128 | Loss |
| LC2L2 | 06/10/1993 | Sheffield Wednesday | 1-0 | Bolton Wanderers | | | 16,194 | Loss |
| D1 | 02/10/1993 | Bristol City | 2-0 | Bolton Wanderers | | | 7,704 | Loss |
| D1 | 26/09/1993 | Bolton Wanderers | 4-3 | Nottingham Forest | Lee D 2, Thompson A, Patterson | Highlights | 10,578 | Win |
| LC2L1 | 21/09/1993 | Bolton Wanderers | 1-1 | Sheffield Wednesday | Kelly (pen) | | 11,590 | Draw |
| D1 | 18/09/1993 | Bolton Wanderers | 1-2 | Leicester City | McGinlay (pen) | | 12,049 | Loss |
| AITQ | 14/09/1993 | Bolton Wanderers | 2-0 | Sunderland | Coyle 2 | | 3,460 | Win |
| D1 | 11/09/1993 | Luton Town | 0-2 | Bolton Wanderers | McGinlay 2 | | 7,189 | Win |
| AITQ | 07/09/1993 | Tranmere Rovers | 1-2 | Bolton Wanderers | McGinlay, Coyle | | 2,786 | Win |
| D1 | 31/08/1993 | Bolton Wanderers | 1-0 | Oxford United | McGinlay | | 8,230 | Win |
| D1 | 28/08/1993 | Charlton Athletic | 3-0 | Bolton Wanderers | | | 7,573 | Loss |
| LC1L2 | 24/08/1993 | Bury | 0-2 | Bolton Wanderers | Coyle, McGinlay (aet) (Won 3-0 on penalties) | Highlights | 4,528 | Win |
| D1 | 21/08/1993 | Bolton Wanderers | 1-1 | Stoke City | Coyle | | 11,328 | Draw |
| LC1L1 | 17/08/1993 | Bolton Wanderers | 0-2 | Bury | | | 6,455 | Loss |
| D1 | 14/08/1993 | Grimsby Town | 0-0 | Bolton Wanderers | | | 8,593 | Draw |